33 lines
757 B
Makefile
33 lines
757 B
Makefile
# Created by: Dan Siercks <dsiercks@uwm.edu>
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# $FreeBSD$
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PORTNAME= trimmomatic
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DISTVERSION= 0.39
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CATEGORIES= biology java
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MASTER_SITES= http://www.usadellab.org/cms/uploads/supplementary/Trimmomatic/
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DISTNAME= Trimmomatic-${PORTVERSION}
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MAINTAINER= jwb@FreeBSD.org
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COMMENT= Flexible read trimming tool for Illumina NGS data
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LICENSE= GPLv3
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LICENSE_FILE= ${WRKSRC}/LICENSE
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USES= zip
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USE_JAVA= yes
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JAVA_VERSION= 1.6+
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JAVA_RUN= yes
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NO_BUILD= yes
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NO_ARCH= yes
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SUB_FILES= trimmomatic
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do-install:
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${INSTALL_DATA} ${WRKSRC}/trimmomatic-${PORTVERSION}.jar \
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${STAGEDIR}${JAVAJARDIR}/trimmomatic.jar
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cd ${WRKSRC} && ${COPYTREE_SHARE} adapters ${STAGEDIR}${DATADIR}
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${INSTALL_SCRIPT} ${WRKDIR}/trimmomatic ${STAGEDIR}${PREFIX}/bin
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.include <bsd.port.mk>
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