146 lines
3.2 KiB
Makefile
146 lines
3.2 KiB
Makefile
# $FreeBSD$
|
|
#
|
|
|
|
COMMENT = Biology
|
|
|
|
SUBDIR += artemis
|
|
SUBDIR += avida
|
|
SUBDIR += babel
|
|
SUBDIR += bamtools
|
|
SUBDIR += bcftools
|
|
SUBDIR += bedtools
|
|
SUBDIR += biococoa
|
|
SUBDIR += bowtie
|
|
SUBDIR += bowtie2
|
|
SUBDIR += bwa
|
|
SUBDIR += canu
|
|
SUBDIR += cd-hit
|
|
SUBDIR += cdbfasta
|
|
SUBDIR += chemeq
|
|
SUBDIR += clustal-omega
|
|
SUBDIR += clustalw
|
|
SUBDIR += clustalx
|
|
SUBDIR += consed
|
|
SUBDIR += cytoscape
|
|
SUBDIR += ddocent
|
|
SUBDIR += diamond
|
|
SUBDIR += emboss
|
|
SUBDIR += exonerate
|
|
SUBDIR += fasta
|
|
SUBDIR += fasta3
|
|
SUBDIR += fastahack
|
|
SUBDIR += fastdnaml
|
|
SUBDIR += fastool
|
|
SUBDIR += fastqc
|
|
SUBDIR += fasttree
|
|
SUBDIR += fastx-toolkit
|
|
SUBDIR += fluctuate
|
|
SUBDIR += freebayes
|
|
SUBDIR += garlic
|
|
SUBDIR += gff2ps
|
|
SUBDIR += gmap
|
|
SUBDIR += gperiodic
|
|
SUBDIR += grappa
|
|
SUBDIR += hmmer
|
|
SUBDIR += htslib
|
|
SUBDIR += hyphy
|
|
SUBDIR += igv
|
|
SUBDIR += infernal
|
|
SUBDIR += iolib
|
|
SUBDIR += iqtree
|
|
SUBDIR += jalview
|
|
SUBDIR += jellyfish
|
|
SUBDIR += kallisto
|
|
SUBDIR += lagan
|
|
SUBDIR += lamarc
|
|
SUBDIR += libgtextutils
|
|
SUBDIR += libsbml
|
|
SUBDIR += linux-foldingathome
|
|
SUBDIR += mafft
|
|
SUBDIR += mapm3
|
|
SUBDIR += migrate
|
|
SUBDIR += molden
|
|
SUBDIR += mopac
|
|
SUBDIR += mrbayes
|
|
SUBDIR += mummer
|
|
SUBDIR += muscle
|
|
SUBDIR += ncbi-blast+
|
|
SUBDIR += ncbi-toolkit
|
|
SUBDIR += ngs-sdk
|
|
SUBDIR += njplot
|
|
SUBDIR += p5-AcePerl
|
|
SUBDIR += p5-Bio-ASN1-EntrezGene
|
|
SUBDIR += p5-Bio-Coordinate
|
|
SUBDIR += p5-Bio-Das
|
|
SUBDIR += p5-Bio-Das-Lite
|
|
SUBDIR += p5-Bio-FeatureIO
|
|
SUBDIR += p5-Bio-GFF3
|
|
SUBDIR += p5-Bio-Glite
|
|
SUBDIR += p5-Bio-Graphics
|
|
SUBDIR += p5-Bio-MAGETAB
|
|
SUBDIR += p5-Bio-NEXUS
|
|
SUBDIR += p5-Bio-Phylo
|
|
SUBDIR += p5-Bio-SCF
|
|
SUBDIR += p5-BioPerl
|
|
SUBDIR += p5-BioPerl-Run
|
|
SUBDIR += p5-TrimGalore
|
|
SUBDIR += p5-transdecoder
|
|
SUBDIR += paml
|
|
SUBDIR += pbbam
|
|
SUBDIR += pbcopper
|
|
SUBDIR += pbseqan
|
|
SUBDIR += pear-merger
|
|
SUBDIR += phrap
|
|
SUBDIR += phred
|
|
SUBDIR += phylip
|
|
SUBDIR += phyml
|
|
SUBDIR += plinkseq
|
|
SUBDIR += primer3
|
|
SUBDIR += protomol
|
|
SUBDIR += psi88
|
|
SUBDIR += py-Genesis-PyAPI
|
|
SUBDIR += py-biom-format
|
|
SUBDIR += py-biopython
|
|
SUBDIR += py-bx-python
|
|
SUBDIR += py-cutadapt
|
|
SUBDIR += py-loompy
|
|
SUBDIR += py-macs2
|
|
SUBDIR += py-orange3-bioinformatics
|
|
SUBDIR += py-orange3-single-cell
|
|
SUBDIR += py-pysam
|
|
SUBDIR += pycogent
|
|
SUBDIR += pyfasta
|
|
SUBDIR += python-nexus
|
|
SUBDIR += rainbow
|
|
SUBDIR += recombine
|
|
SUBDIR += ruby-bio
|
|
SUBDIR += rubygem-bio
|
|
SUBDIR += samtools
|
|
SUBDIR += seaview
|
|
SUBDIR += seqan
|
|
SUBDIR += seqan-apps
|
|
SUBDIR += seqan1
|
|
SUBDIR += seqio
|
|
SUBDIR += seqtk
|
|
SUBDIR += seqtools
|
|
SUBDIR += sim4
|
|
SUBDIR += slclust
|
|
SUBDIR += smithwaterman
|
|
SUBDIR += stacks
|
|
SUBDIR += stringtie
|
|
SUBDIR += tRNAscan-SE
|
|
SUBDIR += t_coffee
|
|
SUBDIR += tabixpp
|
|
SUBDIR += treepuzzle
|
|
SUBDIR += trimadap
|
|
SUBDIR += trimmomatic
|
|
SUBDIR += ugene
|
|
SUBDIR += unanimity
|
|
SUBDIR += vcflib
|
|
SUBDIR += vcftools
|
|
SUBDIR += velvet
|
|
SUBDIR += wise
|
|
SUBDIR += xmolwt
|
|
|
|
.include <bsd.port.subdir.mk>
|