77 lines
2.3 KiB
Makefile
77 lines
2.3 KiB
Makefile
# Created by: Johann Visagie <johann@egenetics.com>
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# $FreeBSD$
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PORTNAME= fasta3
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PORTVERSION= 36.3.8
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CATEGORIES= biology
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MASTER_SITES= http://faculty.virginia.edu/wrpearson/fasta/fasta36/
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DISTNAME= fasta-${PORTVERSION}
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DIST_SUBDIR= fasta3/2014-01-29
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MAINTAINER= wendell@bsd.com.br
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COMMENT= Collection of programs for searching DNA and protein databases
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LICENSE= Fasta
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LICENSE_NAME= Fasta program copyright W. Pearson and U.Virginia
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LICENSE_FILE= ${WRKSRC}/COPYRIGHT
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LICENSE_PERMS= dist-mirror dist-sell pkg-mirror pkg-sell auto-accept
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OPTIONS_DEFINE= DOCS EXAMPLES
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NO_CDROM= May not be sold or incorporated into a commercial product
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WRKSRC= ${WRKDIR}/${DISTNAME}
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BUILD_WRKSRC= ${WRKSRC}/src
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INSTALL_WRKSRC= ${BUILD_WRKSRC}
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MAKEFILE= Makefile.freebsd
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MAKE_ENV= THR_LIBS="-pthread" XDIR="${STAGEDIR}${PREFIX}/bin" \
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FASTA_HOST="$$(${UNAME} -n)"
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SUB_FILES= pkg-message
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PLIST_SUB= VER="${PORTVERSION:R:R}"
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MAN1_LINKS= fastf35.1 fasts35.1 fastm35.1 fastx35.1 fasty35.1 \
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ggsearch35.1 lalign35.1 ssearch35.1 tfasta35.1 tfastf35.1 \
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tfasts35.1 tfastx35.1 tfasty35.1 prfx35.1 prss35.1
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MAN1_FILES= fasta36.1 fastf3.1 fasts3.1 prss3.1 map_db.1 ps_lav.1
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DOC_FILES= README.versions \
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fasta_func.doc readme.* fasta.defaults \
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fasta.options fasta_versions.html changes*.html
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DATA= data/*.mat
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EXAMPLES= seq/*.aa seq/*.lc seq/*.seq seq/*.lib
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post-patch:
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@${CP} ${WRKSRC}/make/${MAKEFILE} ${BUILD_WRKSRC}
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@${RM} ${WRKSRC}/bin/README
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post-install:
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(cd ${WRKSRC}/bin && ${INSTALL_PROGRAM} * ${STAGEDIR}${PREFIX}/bin)
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(cd ${WRKSRC}/conf && ${INSTALL_DATA} fastlibs \
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${STAGEDIR}${PREFIX}/etc/fastlibs.sample)
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@${MKDIR} ${STAGEDIR}${DATADIR}
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.for data in ${DATA}
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(cd ${WRKSRC} && ${INSTALL_DATA} ${data} ${STAGEDIR}${DATADIR})
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.endfor
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.for manpage in ${MAN1_FILES}
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(cd ${WRKSRC}/doc && ${INSTALL_MAN} ${manpage} \
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${STAGEDIR}${MAN1PREFIX}/man/man1)
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.endfor
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.for links in ${MAN1_LINKS}
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(${LN} -sf fasta36.1 ${STAGEDIR}${MAN1PREFIX}/man/man1/${links})
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.endfor
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@${MKDIR} ${STAGEDIR}${DOCSDIR}
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.for i in COPYRIGHT FASTA_LIST README
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(cd ${WRKSRC} && ${INSTALL_DATA} ${i} ${STAGEDIR}${DOCSDIR})
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.endfor
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.for docfile in ${DOC_FILES}
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(cd ${WRKSRC}/doc && ${INSTALL_DATA} ${docfile} ${STAGEDIR}${DOCSDIR})
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.endfor
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@${MKDIR} ${STAGEDIR}${EXAMPLESDIR}
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.for ex in ${EXAMPLES}
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(cd ${WRKSRC} && ${INSTALL_DATA} ${ex} ${STAGEDIR}${EXAMPLESDIR})
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.endfor
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.include <bsd.port.mk>
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